Man pages for ldvroditi/Franken
Clustering algorithm suitable for high-dimensional and high-throughput data
| AddFlowFramefrkn | Add a flowFrame to the data variable of the flowSOM object |
| BuildKNNGfrkn | Builds k-nearest neighbor graph |
| BuildSOMfrkn | Build self-organizing map (borrowed from FlowSOM) |
| colMax | Column-wise max of a data frame |
| colRank | Rank of a column of a data frame |
| Franken | Franken Package |
| Franken_data_prep | Prepare data for Franken run |
| FrankenTest | Franken Package Test |
| GetClusters | Get cluster label for every individual cells |
| ReadInputfrkn | Read fcs-files, flowframes, data tables or data frames |
| rowMax | Row-wise max of a data frame |
| update_ReadInput_file | Updates flowSOM object after data subsetting |
| walk_metaclustering | Performs walktrap clustering of knn graph on SOM nodes |
