leekgroup/regionReport: Generate HTML or PDF reports for a set of genomic regions or DESeq2/edgeR results

Generate HTML or PDF reports to explore a set of regions such as the results from annotation-agnostic expression analysis of RNA-seq data at base-pair resolution performed by derfinder. You can also create reports for DESeq2 or edgeR results.

Getting started

Package details

Bioconductor views Coverage DifferentialExpression DifferentialMethylation DifferentialPeakCalling ImmunoOncology QualityControl RNASeq ReportWriting Sequencing Software Transcription Visualization
URL https://github.com/leekgroup/regionReport
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
leekgroup/regionReport documentation built on May 10, 2023, 11:37 p.m.