Function with 3 options_ Edit_ct, classify UL , classify thermos This follows Marios scheme for classifying our cell types
1 | Cell_Typer_2(tmp_rd, edit_ct = F, UL_classify = T, GFP = T, cell_types = NA)
|
edit_ct |
Logical, if true each cell class will be double checked |
UL_classify |
default is T If TRUE then classify large diameter cells |
GFP |
logical, default is T if TRUE then classify green cells |
cell_types |
list input. This is mainly used if the large cell types have already been classified. If so then then the large cell types are passed straight to the cell_types |
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