get_consensus: Get the consensus sequence from a multiple sequence alignment
In leonjessen/SigniSite: Analysis of Genotype-phenotype correlations in protein multiple sequence alignments
Description
Usage
Arguments
Value
Examples
View source: R/get_consensus.R
Description
For each position, the most frequently observed amino acid residue forms the consensus sequence
Usage
1
get_consensus(sequences)
Arguments
sequences
A set of sequences forming a multiple sequence alignment
Value
A single sequence, representing the consensus sequence
Examples
1
get_signisite_zscores(ALIGNMENT$sequence, get_values(ALIGNMENT$fasta_header))
leonjessen/SigniSite documentation built on May 2, 2020, 6:31 a.m.
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Description Usage Arguments Value Examples
View source: R/get_consensus.R
Description
For each position, the most frequently observed amino acid residue forms the consensus sequence
Usage
1 | get_consensus(sequences)
|
Arguments
sequences |
A set of sequences forming a multiple sequence alignment |
Value
A single sequence, representing the consensus sequence
Examples
1 | get_signisite_zscores(ALIGNMENT$sequence, get_values(ALIGNMENT$fasta_header))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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