Description Usage Arguments Value Examples
View source: R/signisite_zmat.R
Run the SigniSite workflow
1 | signisite_zmat(file, method = "bonferroni", alpha = 0.05)
|
file |
A multiple sequence alignment in FASTA format |
method |
method for correcting for multiple testing, one of c("holm", "hochberg", "hommel", "bonferroni", "BH", "BY", "fdr", "none"), see ?p.adjust for more. Default: bonferroni |
alpha |
the level of significance. Default: 0.05 |
A matrix of SigniSite z-scores, corrected for multiple testing and truncated to significant positions
1 | signisite_zmat(file = 'path/to/my/msa_file.fsa')
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.