plot_signisite_logo: Plot the results of a SigniSite analysis as a sequence logo
In leonjessen/SigniSite: Analysis of Genotype-phenotype correlations in protein multiple sequence alignments
Description
Usage
Arguments
Value
Examples
View source: R/plot_signisite_logo.R
Description
Plot the results of a SigniSite analysis as a sequence logo
Usage
1
Arguments
z
A matrix of z-scores
Value
A ggplot object
Examples
1
2
3
z_mat = get_signisite_zscores(ALIGNMENT$sequence, get_values(ALIGNMENT$fasta_header))
z_mat_sp = rm_ns_positions(z_mat, alpha = 0.05)
plot_SigniSite_logo(z_mat_sp)
leonjessen/SigniSite documentation built on May 2, 2020, 6:31 a.m.
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Description Usage Arguments Value Examples
View source: R/plot_signisite_logo.R
Description
Plot the results of a SigniSite analysis as a sequence logo
Usage
1 |
Arguments
z |
A matrix of z-scores |
Value
A ggplot object
Examples
1 2 3 | z_mat = get_signisite_zscores(ALIGNMENT$sequence, get_values(ALIGNMENT$fasta_header))
z_mat_sp = rm_ns_positions(z_mat, alpha = 0.05)
plot_SigniSite_logo(z_mat_sp)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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