Top_SRV.plot: Plot top SRV clusters
In lhedjazi/mQTL.NMR: Metabolomic Quantitative Trait Locus Mapping for 1H NMR data

Description Usage Arguments Author(s) See Also Examples

Plot lines defined by SRV on top SRV clusters

1	Top_SRV.plot(file1,file2,results,met,intMeth,clustidx)

`file1`	a text file with NMR data
`file2`	a text file with SRV clusters
`results`	a list containinig results of mQTL mapping
`met`	a character specifying the summarizing statistical measure of peaks
`intMeth`	a charcter specifying summarizing method across samples ("mean" or "max")
`clustidx`	index specifying the SRV cluser of interest (optinal)

Lyamine Hedjazi

SRV.plot

load_datafiles()

load(results)

# Format data

format_mQTL(phenofile,genofile,physiodat,cleandat,cleangen)

## Plot SRV profile
Top_SRV.plot(file1=cleandat,file2=rectangle_SRV,results=results,met=met,intMeth="mean")