MultiGSEAResult: A MultiGSEAResult object holds the results from a multiGSEA...
In lianos/multiGSEA: A unified interface to a plethora of gene set enrichment analysis methods
Description
A call to multiGSEA() will produce analyses for an
arbitrary number of GSEA methods, the results of which will be stored and
accessible here using the result(), results(), and resultNames().
In addition, the GeneSetDb() used for the analysis is accessible
via geneSetDb(), and the results from the differential
expression analysis is available via logFC().
Visualizing results of a geneset based analysis also are functions that
operate over a MultiGSEAResult object, for instance see the
iplot() and multiGSEA.shiny::explore() functions.
Slots
gsdThe GeneSetDb() this analysis was run over
resultsThe list of individual results generated by each of the
GSEA methods that were run.
logFCThe differential expression statistics for each individual
feature measured in the experiment.
lianos/multiGSEA documentation built on Nov. 17, 2020, 1:26 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
A call to multiGSEA() will produce analyses for an
arbitrary number of GSEA methods, the results of which will be stored and
accessible here using the result(), results(), and resultNames().
In addition, the GeneSetDb() used for the analysis is accessible
via geneSetDb(), and the results from the differential
expression analysis is available via logFC().
Visualizing results of a geneset based analysis also are functions that
operate over a MultiGSEAResult object, for instance see the
iplot() and multiGSEA.shiny::explore() functions.
Slots
gsdThe
GeneSetDb()this analysis was run overresultsThe list of individual results generated by each of the GSEA methods that were run.
logFCThe differential expression statistics for each individual feature measured in the experiment.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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