secondary_data_add: Compare the new genes from focal species to target genome and...
In lijing28101/fagin2: Annotate Orphan Genes
Description
Usage
Arguments
Value
View source: R/fagin_new_gene.R
Description
Compare the new genes from focal species to target genome and calculate significance
Usage
1
secondary_data_add(con, quesp, tarsp, quename, tarname, pair, gene_path)
Arguments
con
configuration
quesp
a list of species metadata for focal species from load_species
tarsp
a list of species metadata for target species from load_species
quename
a string of focal species name
tarname
a string of target species name
pair
existing pair
gene_path
path to the gene list
Value
a list of alignment result with pvalue, and save the list as rds file
lijing28101/fagin2 documentation built on Jan. 8, 2022, 3:15 a.m.
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Description Usage Arguments Value
View source: R/fagin_new_gene.R
Description
Compare the new genes from focal species to target genome and calculate significance
Usage
1 | secondary_data_add(con, quesp, tarsp, quename, tarname, pair, gene_path)
|
Arguments
con |
configuration |
quesp |
a list of species metadata for focal species from load_species |
tarsp |
a list of species metadata for target species from load_species |
quename |
a string of focal species name |
tarname |
a string of target species name |
pair |
existing pair |
gene_path |
path to the gene list |
Value
a list of alignment result with pvalue, and save the list as rds file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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