API for lijingya/ELMER
Inferring Regulatory Element Landscapes and Transcription Factor
Networks Using Cancer Methylomes
| Global functions | |
|---|---|
| Binary | Source code |
| GeneIDName | Source code |
| Get.Pvalue.p | Source code |
| GetNearGenes | Man page Source code |
| MEE.data-class | Man page |
| Pair-class | Man page |
| Stat.diff.meth | Source code |
| Stat.nonpara | Source code |
| Stat.nonpara.permu | Source code |
| TCGA.pipe | Man page Source code |
| TF.rank.plot | Man page Source code |
| fetch.mee | Man page Source code |
| fetch.pair | Man page Source code |
| get.TFs | Man page Source code |
| get.diff.meth | Man page Source code |
| get.enriched.motif | Man page Source code |
| get.feature.probe | Man page Source code |
| get.pair | Man page Source code |
| get.permu | Man page Source code |
| get450K | Man page Source code |
| getClinic | Man page Source code |
| getExp | Man page |
| getExp,MEE.data-method | Man page |
| getGeneID | Man page Source code |
| getGeneInfo | Man page |
| getGeneInfo,ANY-method | Man page |
| getMeth | Man page |
| getMeth,MEE.data-method | Man page |
| getPair | Man page |
| getPair,Pair-method | Man page |
| getProbeInfo | Man page |
| getProbeInfo,ANY-method | Man page |
| getRNAseq | Man page Source code |
| getSample | Man page |
| getSample,MEE.data-method | Man page |
| getSymbol | Man page Source code |
| getTCGA | Man page Source code |
| lm_eqn | Source code |
| matrixClinic | Source code |
| matrixMeth | Source code |
| matrixRNA | Source code |
| mee.data | Source code |
| motif.enrichment.plot | Man page Source code |
| pair.data | Source code |
| promoterMeth | Man page Source code |
| scatter | Source code |
| scatter.plot | Man page Source code |
| schematic | Source code |
| schematic.plot | Man page Source code |
| splitmatrix | Source code |
| standardizeTcgaId | Source code |
| tcgaSampleType | Source code |
| txs | Man page Source code |
