Files in lijingya/ELMER
Inferring Regulatory Element Landscapes and Transcription Factor
Networks Using Cancer Methylomes
.Rbuildignore
.gitignore
DESCRIPTION
ELMER.Rproj
NAMESPACE
R/Class.R
R/FetchTCGA.R
R/GetNearbyGenes.R
R/Main_function.R
R/Scatter.plot.R
R/Schematic.plot.R
R/Small.R
R/StatisticTest.R
R/TCGA_pipe.R
R/generic.R
R/methodAccess.R
R/motif.TF.Plots.R
README.md
inst/doc/ELMER_manual.pdf
inst/extdata/.Rapp.history
inst/extdata/getTF.hypo.TFs.with.motif.pvalue.rda
inst/extdata/mee.example.rda
man/GetNearGenes.Rd
man/MEE.data-class.Rd
man/Pair-class.Rd
man/TCGA.pipe.Rd
man/TF.rank.plot.Rd
man/fetch.mee.Rd
man/fetch.pair.Rd
man/get.TFs.Rd
man/get.diff.meth.Rd
man/get.enriched.motif.Rd
man/get.feature.probe.Rd
man/get.pair.Rd
man/get.permu.Rd
man/get450K.Rd
man/getClinic.Rd
man/getExp.Rd
man/getGeneID.Rd
man/getGeneInfo.Rd
man/getMeth.Rd
man/getPair.Rd
man/getProbeInfo.Rd
man/getRNAseq.Rd
man/getSample.Rd
man/getSymbol.Rd
man/getTCGA.Rd
man/motif.enrichment.plot.Rd
man/promoterMeth.Rd
man/scatter.plot.Rd
man/schematic.plot.Rd
man/txs.Rd
vignettes/vignettes.Rnw
vignettes/vignettes.pdf
