API for lijingya/ELMER
Inferring Regulatory Element Landscapes and Transcription Factor Networks Using Cancer Methylomes

Global functions
Binary Source code
GeneIDName Source code
Get.Pvalue.p Source code
GetNearGenes Man page Source code
MEE.data-class Man page
NearGenes Source code
Pair-class Man page
Stat.diff.meth Source code
Stat.nonpara Source code
Stat.nonpara.permu Source code
TCGA.pipe Man page Source code
TF.rank.plot Man page Source code
fetch.mee Man page Source code
fetch.pair Man page Source code
get.TFs Man page Source code
get.diff.meth Man page Source code
get.enriched.motif Man page Source code
get.feature.probe Man page Source code
get.pair Man page Source code
get.permu Man page Source code
get450K Man page Source code
getClinic Man page Source code
getExp Man page
getExp,MEE.data-method Man page
getGeneID Man page Source code
getGeneInfo Man page
getGeneInfo,ANY-method Man page
getMeth Man page
getMeth,MEE.data-method Man page
getPair Man page
getPair,Pair-method Man page
getProbeInfo Man page
getProbeInfo,ANY-method Man page
getRNAseq Man page Source code
getSample Man page
getSample,MEE.data-method Man page
getSymbol Man page Source code
getTCGA Man page Source code
lm_eqn Source code
matrixClinic Source code
matrixMeth Source code
matrixRNA Source code
mee.data Source code
motif.enrichment.plot Man page Source code
pair.data Source code
promoterMeth Man page Source code
scatter Source code
scatter.plot Man page Source code
schematic Source code
schematic.plot Man page Source code
splitmatrix Source code
standardizeTcgaId Source code
tcgaSampleType Source code
txs Man page Source code
lijingya/ELMER documentation built on May 21, 2017, 1:35 p.m.