RNAseq_data: Bottomly

In linbingqing/stableDE: Stability of methods for differential expression analysis of RNA-Seq data

Description

RNA-seq count data from Bottomly et al. (2011) that compares two genetically homogeneous mice strains, C57BL/6J and DBA/2J. This dataset contains ten and eleven replicates for each condition.

Usage

RNAseq_data(sel_size = 3)

Arguments

sel_size

number of replicates of each condition for evaluation set, default value is 3.

Value

counts_evaluation matrix of evaluation RNAseq dataset

group_evaluation factors of evaluation RNAseq dataset

design_evaluation design matrix of evaluation RNAseq dataset

counts_verification matrix of verification RNAseq dataset

group_verification factors of verification RNAseq dataset

design_verification design matrix of verification RNAseq dataset

counts_full matrix of full RNAseq dataset

group_full factors of full RNAseq dataset

design_full design matrix of full RNAseq dataset

Examples

bottomly <- RNAseq_data(sel_size = 3)

linbingqing/stableDE documentation built on May 29, 2019, 3:06 a.m.