AUCOR_fun: AUCOR
In linbingqing/stableDE: Stability of methods for differential expression analysis of RNA-Seq data
Description
Usage
Arguments
Value
Examples
Description
Calculate AUCOR
Usage
1
AUCOR_fun(object)
Arguments
object
object from function "ave_similarites"
Value
smooth_line fitted smooth line for average of similaries against
perturbed sizes
AUCOR AUCOR value
Examples
1
2
3
4
bottomly <- RNAseq_data(sel_size = 3)
ave <- ave_similarities(counts = bottomly$counts_evaluation,
group = bottomly$group_evaluation, DEmethod = "edgeR")
res <- AUCOR_fun(ave$ave_sim)
linbingqing/stableDE documentation built on May 29, 2019, 3:06 a.m.
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Description Usage Arguments Value Examples
Description
Calculate AUCOR
Usage
1 | AUCOR_fun(object)
|
Arguments
object |
object from function "ave_similarites" |
Value
smooth_line fitted smooth line for average of similaries against perturbed sizes
AUCOR AUCOR value
Examples
1 2 3 4 | bottomly <- RNAseq_data(sel_size = 3)
ave <- ave_similarities(counts = bottomly$counts_evaluation,
group = bottomly$group_evaluation, DEmethod = "edgeR")
res <- AUCOR_fun(ave$ave_sim)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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