Files in lindsaypino/MSstats-patch
Protein Significance Analysis in DDA, SRM and DIA for Label-free or Label-based Proteomics Experiments

.BBSoptions
DESCRIPTION
NAMESPACE
NEWS
R/DataProcess.R R/DataProcessPlots.R R/GroupComparison.R R/GroupComparisonPlots.R R/MaxQtoMSstatsFormat.R R/PDtoMSstatsFormat.R R/ProgenesistoMSstatsFormat.R R/Quantification.R R/SampleSizeCalculation.R R/SkylinetoMSstatsFormat.R R/SpectronauttoMSstatsFormat.R R/TransformMSnSet.R R/linear_quantlim.R R/lodq_util.R R/methods.R R/modelBasedQCPlots.R R/nonlinear_quantlim.R R/plot_quantlim.R README.md
data/DDARawData.RData
data/DDARawData.Skyline.RData
data/DIARawData.RData
data/SRMRawData.RData
data/SpikeInDataLinear.RData
data/SpikeInDataNonLinear.RData
dev/2017-08-01/NULL
dev/2017-08-01/VVEVAPAK_NONLINEAR_overall.svg
dev/2017-08-01/VVEVAPAK_NONLINEAR_zoom.svg
dev/20170202_figuresofmerit_batch.R
dev/TEST_df.csv
dev/UPS_water_curve_encyclopedia.elib.peptides.MELTED.csv
dev/calibration_data_norm.csv
dev/test_df2.csv
dev/testset_lodloq.csv
inst/CITATION
inst/doc/MSstats-manual.pdf inst/doc/MSstats.R inst/doc/MSstats.Rmd
inst/doc/MSstats.html
man/DDARawData.Rd man/DDARawData.Skyline.Rd man/DIARawData.Rd man/MSstats-package.Rd man/MaxQtoMSstatsFormat.Rd man/PDtoMSstatsFormat.Rd man/ProgenesistoMSstatsFormat.Rd man/SRMRawData.Rd man/SkylinetoMSstatsFormat.Rd man/SpectronauttoMSstatsFormat.Rd man/SpikeInDataLinear.Rd man/SpikeInDataNonLinear.Rd man/dataProcess.Rd man/dataProcessPlots.Rd man/designSampleSize.Rd man/designSampleSizePlots.Rd man/groupComparison.Rd man/groupComparisonPlots.Rd man/linear_quantlim.Rd man/modelBasedQCPlots.Rd man/nonlinear_quantlim.Rd man/plot_quantlim.Rd man/quantification.Rd man/transformMSnSetToMSstats.Rd man/transformMSstatsToMSnSet.Rd
lindsaypino/MSstats-patch documentation built on Aug. 2, 2017, 3:04 a.m.