Man pages for linquynus/TFregulomeR-dev
TFregulomeR reveals transcription factors’ context-specific features and functions

cofactorReportcofactorReport
commonPeakResultcommonPeaks result
commonPeakscommonPeaks
dataBrowserBrowse the current data available in TFregulomeR
exclusivePeakResultexclusivePeaks result
exclusivePeaksexclusivePeaks
exportMMPFMexport motif position frequency matrix and beta score matrix
genomeAnnotategenomeAnnotate
greatAnnotategreatAnnotate
interactome3Dinteractome3D
intersectPeakMatrixintersectPeakMatrix
intersectPeakMatrixResultintersectPeakMatrix result
loadPeaksload peaks from TFregulomeR
motifDistribprofile TFBS distribution
plotDistribplot TFBS distribution from motifDistrib() output
plotLogoplot (Meth)Motif logo
searchMotifSearch motif PFM and beta score matrix (if source is...
toTFBSToolsconvert motif PFM in TFregulomeR into PFMatrix class object...
linquynus/TFregulomeR-dev documentation built on May 12, 2020, 11:23 p.m.