plotDistrib: plot TFBS distribution from motifDistrib() output
In linquynus/TFregulomeR-dev: TFregulomeR reveals transcription factors’ context-specific features and functions
plotDistrib R Documentation
plot TFBS distribution from motifDistrib() output
Description
This function allows you to plot TFBS distributions in a given list of peak sets from the output of motifDistrib().
Usage
plotDistrib(motifDistrib)
Arguments
motifDistrib
Required. motifDistrib() output.
Value
TFBS distribution PDF file.
Examples
CEBPB_peaks <- loadPeaks(id = "MM1_HSA_K562_CEBPB")
motifDistrib_output <- motifDistrib(id = "MM1_HSA_K562_CEBPB",
peak_list = list(CEBPB_peaks[1:100,]),
peak_id = c("MM1_HSA_K562_CEBPB"))
plotDistrib(motifDistrib = motifDistrib_output)
linquynus/TFregulomeR-dev documentation built on April 23, 2022, 11:11 a.m.
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| plotDistrib | R Documentation |
plot TFBS distribution from motifDistrib() output
Description
This function allows you to plot TFBS distributions in a given list of peak sets from the output of motifDistrib().
Usage
plotDistrib(motifDistrib)
Arguments
motifDistrib |
Required. motifDistrib() output. |
Value
TFBS distribution PDF file.
Examples
CEBPB_peaks <- loadPeaks(id = "MM1_HSA_K562_CEBPB")
motifDistrib_output <- motifDistrib(id = "MM1_HSA_K562_CEBPB",
peak_list = list(CEBPB_peaks[1:100,]),
peak_id = c("MM1_HSA_K562_CEBPB"))
plotDistrib(motifDistrib = motifDistrib_output)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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