Module_inf: Module and protein information.

In liukf10/TEST: Disease-Drived Differential Proteins and Proteome-Wide Co-Expression Network Associated Analysis

Description

module and protein information match

Usage

Module_inf(net, inf, inftype = "Convert", IDname = NULL, ...)

Arguments

net	module network which is calculated in WGCNA package.
inf	proteome quantification data information which contains protein IDs.
inftype	data information type. This must be (an abbreviation of) one of the strings "Convert","MaxQ","none". "Convert" means protein ID is converted by MaxquantDataconvert function. "MaxQ" means original Maxquant software quantification data information.
IDname	IDname is "inf" column names which will extract.
...	other argument.

Author(s)

Kefu Liu

Examples

rm(list = ls())
library(DDPNA)
data(net)
data(imputedData)
data <- imputedData
Module <- Module_inf(net, data$inf)

liukf10/TEST documentation built on May 20, 2019, 12:59 a.m.