convertNformatID: Match different identifiers to gene sets provided

In liulihe954/EnrichKit: Perform hypergeometric-based over-presentation analysis

Description

Match different identifiers to gene sets provided

Usage

convertNformatID(GeneSetNames, SigGene_list, TotalGene_list, IDtype = "ens")

Arguments

GeneSetNames	Sigle or multiple gene set names, put into a vector if multiple. e.g. c('Lactation1','Lactation2','Lactation3')
SigGene_list	An list object; where each element contains signifcant genes. list dimension must match TotalGene_list
TotalGene_list	An list object; where each element contains total genes. list dimension must match SigGene_list
IDtype	Gene Identifier type, choose from c("ens","entrez","symbol")

Value

An list object with same dimension as SigGene_list and Totalgene_list, where each element has comprehensive id information.

liulihe954/EnrichKit documentation built on Oct. 10, 2020, 11:49 p.m.