calcDensity: Calculate density in a given region

In liuyujie0136/tinyfuncr: tiny R functions

Calculate density in a given region

Description

Calculate density in a given region with a slide window

Usage

calcDensity(pos_info, region_info, slide_window = 1e+05)

Arguments

pos_info	tab-separated file (or a data frame) containing position information of items to calculate density, with first column being "ID", second being "Pos". File should NOT have header.
region_info	tab-separated file (or a data frame) containing information about the full-length region to calculate density in, with first column being "ID", second being "Start", third being "End". File should NOT have header.
slide_window	length of each slide window, default 100kb

Author(s)

Yujie Liu

liuyujie0136/tinyfuncr documentation built on Dec. 13, 2024, 8:49 a.m.