extractPos: Extract All Elements from GFF3 File
In liuyujie0136/tinyfuncr: tiny R functions
extractPos R Documentation
Extract All Elements from GFF3 File
Description
Extract all elements (promoter, UTR, CDS, intron) of each gene from GFF3 file into BED format
Usage
extractPos(gff_file, chr_len_file, bed_file)
Arguments
gff_file
GFF3 file
chr_len_file
file containing chromosome length
bed_file
BED file for output
Author(s)
Yujie Liu
liuyujie0136/tinyfuncr documentation built on Dec. 13, 2024, 8:49 a.m.
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| extractPos | R Documentation |
Extract All Elements from GFF3 File
Description
Extract all elements (promoter, UTR, CDS, intron) of each gene from GFF3 file into BED format
Usage
extractPos(gff_file, chr_len_file, bed_file)
Arguments
gff_file |
GFF3 file |
chr_len_file |
file containing chromosome length |
bed_file |
BED file for output |
Author(s)
Yujie Liu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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