vcf_to_SNVinput: Create SNV Distance Matrix input from VCF File
In lizamathews/CAISC: Clonal Architecture with Integration of SNV and CNV
Description
Usage
Arguments
Value
View source: R/snv_distance_matrix.R
Description
This function finds chromosome information, alternative allele read counts (X),
total read counts (N), and mutation profile matrix (Z) from VCF file of mutations
Usage
1
vcf_to_SNVinput(filevcf)
Arguments
filevcf
Path to input VCF file
Value
List with Mutation Information (Info, X, N, Z)
lizamathews/CAISC documentation built on Dec. 21, 2021, 11:41 a.m.
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Description Usage Arguments Value
View source: R/snv_distance_matrix.R
Description
This function finds chromosome information, alternative allele read counts (X), total read counts (N), and mutation profile matrix (Z) from VCF file of mutations
Usage
1 | vcf_to_SNVinput(filevcf)
|
Arguments
filevcf |
Path to input VCF file |
Value
List with Mutation Information (Info, X, N, Z)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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