obs2data_bio: Correctly format observations into input data for the model

In lkshrsch/gLVInterNetworks: Inference of interaction networks based on generalised Lotka Volterra dynamics

Usage

obs2data_bio(res)

Arguments

res

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (res) 
{
    obs = t(res[, -1])
    X = rbind(1, obs)
    X = X[, 1:ncol(X) - 1]
    Y <- slope(res[, -1])
    Y = t(Y)
    Y[is.nan(Y)] <- 0
    Y[is.infinite(Y)] <- 0
    return(list(Y, X))
  }

lkshrsch/gLVInterNetworks documentation built on May 21, 2019, 7:33 a.m.