wilson: Web-Based Interactive Omics Visualization

Platform

|field |value | |:--------|:----------------------------| |version |R version 4.0.5 (2021-03-31) | |os |Windows 10 x64 | |system |x86_64, mingw32 | |ui |RStudio | |language |(EN) | |collate |German_Germany.1252 | |ctype |German_Germany.1252 | |tz |Europe/Berlin | |date |2021-04-14 |

Dependencies

|package |old |new | | |:--------------------|:----------|:----------|:--| |wilson |2.4.1 |2.4.2 |* | |abind |1.4-5 |1.4-5 | | |annotate |1.68.0 |1.68.0 | | |AnnotationDbi |1.52.0 |1.52.0 | | |askpass |1.1 |1.1 | | |assertthat |0.2.1 |0.2.1 | | |backports |1.2.1 |1.2.1 | | |base64enc |0.1-3 |0.1-3 | | |BH |1.75.0-0 |1.75.0-0 | | |Biobase |2.50.0 |2.50.0 | | |BiocGenerics |0.36.0 |0.36.0 | | |BiocParallel |1.24.1 |1.24.1 | | |bit |4.0.4 |4.0.4 | | |bit64 |4.0.5 |4.0.5 | | |bitops |1.0-6 |1.0-6 | | |blob |1.2.1 |1.2.1 | | |broom |0.7.6 |0.7.6 | | |bslib |0.2.4 |0.2.4 | | |cachem |1.0.4 |1.0.4 | | |Cairo |1.5-12.2 |1.5-12.2 | | |callr |3.6.0 |3.6.0 | | |car |3.0-10 |3.0-10 | | |carData |3.0-4 |3.0-4 | | |caTools |1.18.2 |1.18.2 | | |cellranger |1.1.0 |1.1.0 | | |circlize |0.4.12 |0.4.12 | | |cli |2.4.0 |2.4.0 | | |clipr |0.7.1 |0.7.1 | | |clue |0.3-58 |0.3-58 | | |colorspace |2.0-0 |2.0-0 | | |colourpicker |1.1.0 |1.1.0 | | |commonmark |1.7 |1.7 | | |ComplexHeatmap |2.6.2 |2.6.2 | | |conquer |1.0.2 |1.0.2 | | |corrplot |0.84 |0.84 | | |cowplot |1.1.1 |1.1.1 | | |cpp11 |0.2.7 |0.2.7 | | |crayon |1.4.1 |1.4.1 | | |crosstalk |1.1.1 |1.1.1 | | |curl |4.3 |4.3 | | |data.table |1.14.0 |1.14.0 | | |DBI |1.1.1 |1.1.1 | | |DelayedArray |0.16.3 |0.16.3 | | |dendextend |1.14.0 |1.14.0 | | |DESeq2 |1.30.1 |1.30.1 | | |digest |0.6.27 |0.6.27 | | |dplyr |1.0.5 |1.0.5 | | |DT |0.17 |0.17 | | |egg |0.4.5 |0.4.5 | | |ellipse |0.4.2 |0.4.2 | | |ellipsis |0.3.1 |0.3.1 | | |evaluate |0.14 |0.14 | | |factoextra |1.0.7 |1.0.7 | | |FactoMineR |2.4 |2.4 | | |fansi |0.4.2 |0.4.2 | | |farver |2.1.0 |2.1.0 | | |fastmap |1.1.0 |1.1.0 | | |flashClust |1.01-2 |1.01-2 | | |forcats |0.5.1 |0.5.1 | | |foreach |1.5.1 |1.5.1 | | |formatR |1.8 |1.8 | | |fs |1.5.0 |1.5.0 | | |futile.logger |1.4.3 |1.4.3 | | |futile.options |1.0.1 |1.0.1 | | |gclus |1.3.2 |1.3.2 | | |genefilter |1.72.1 |1.72.1 | | |geneplotter |1.68.0 |1.68.0 | | |generics |0.1.0 |0.1.0 | | |GenomeInfoDb |1.26.7 |1.26.7 | | |GenomeInfoDbData |1.2.4 |1.2.4 | | |GenomicRanges |1.42.0 |1.42.0 | | |GetoptLong |1.0.5 |1.0.5 | | |ggplot2 |3.3.3 |3.3.3 | | |ggpubr |0.4.0 |0.4.0 | | |ggrepel |0.9.1 |0.9.1 | | |ggsci |2.9 |2.9 | | |ggsignif |0.6.1 |0.6.1 | | |GlobalOptions |0.1.2 |0.1.2 | | |glue |1.4.2 |1.4.2 | | |gplots |3.1.1 |3.1.1 | | |gridExtra |2.3 |2.3 | | |gtable |0.3.0 |0.3.0 | | |gtools |3.8.2 |3.8.2 | | |haven |2.3.1 |2.3.1 | | |heatmaply |1.2.1 |1.2.1 | | |highr |0.8 |0.8 | | |hms |1.0.0 |1.0.0 | | |htmltools |0.5.1.1 |0.5.1.1 | | |htmlwidgets |1.5.3 |1.5.3 | | |httpuv |1.5.5 |1.5.5 | | |httr |1.4.2 |1.4.2 | | |IRanges |2.24.1 |2.24.1 | | |isoband |0.2.4 |0.2.4 | | |iterators |1.0.13 |1.0.13 | | |jquerylib |0.1.3 |0.1.3 | | |jsonlite |1.7.2 |1.7.2 | | |knitr |1.31 |1.31 | | |labeling |0.4.2 |0.4.2 | | |lambda.r |1.2.4 |1.2.4 | | |later |1.1.0.1 |1.1.0.1 | | |lazyeval |0.2.2 |0.2.2 | | |leaps |3.1 |3.1 | | |lifecycle |1.0.0 |1.0.0 | | |lme4 |1.1-26 |1.1-26 | | |locfit |1.5-9.4 |1.5-9.4 | | |log4r |0.3.2 |0.3.2 | | |magrittr |2.0.1 |2.0.1 | | |maptools |1.1-1 |1.1-1 | | |markdown |1.1 |1.1 | | |MatrixGenerics |1.2.1 |1.2.1 | | |MatrixModels |0.5-0 |0.5-0 | | |matrixStats |0.58.0 |0.58.0 | | |memoise |2.0.0 |2.0.0 | | |mime |0.10 |0.10 | | |miniUI |0.1.1.1 |0.1.1.1 | | |minqa |1.2.4 |1.2.4 | | |munsell |0.5.0 |0.5.0 | | |nloptr |1.2.2.2 |1.2.2.2 | | |numDeriv |2016.8-1.1 |2016.8-1.1 | | |openssl |1.4.3 |1.4.3 | | |openxlsx |4.2.3 |4.2.3 | | |pbkrtest |0.5.1 |0.5.1 | | |pillar |1.6.0 |1.6.0 | | |pkgconfig |2.0.3 |2.0.3 | | |plogr |0.2.0 |0.2.0 | | |plotly |4.9.3 |4.9.3 | | |plyr |1.8.6 |1.8.6 | | |png |0.1-7 |0.1-7 | | |polynom |1.4-0 |1.4-0 | | |prettyunits |1.1.1 |1.1.1 | | |processx |3.5.1 |3.5.1 | | |progress |1.2.2 |1.2.2 | | |promises |1.2.0.1 |1.2.0.1 | | |ps |1.6.0 |1.6.0 | | |purrr |0.3.4 |0.3.4 | | |qap |0.1-1 |0.1-1 | | |quantreg |5.85 |5.85 | | |R6 |2.5.0 |2.5.0 | | |rappdirs |0.3.3 |0.3.3 | | |RColorBrewer |1.1-2 |1.1-2 | | |Rcpp |1.0.6 |1.0.6 | | |RcppArmadillo |0.10.4.0.0 |0.10.4.0.0 | | |RcppEigen |0.3.3.9.1 |0.3.3.9.1 | | |RCurl |1.98-1.3 |1.98-1.3 | | |readr |1.4.0 |1.4.0 | | |readxl |1.3.1 |1.3.1 | | |registry |0.5-1 |0.5-1 | | |rematch |1.0.1 |1.0.1 | | |reshape |0.8.8 |0.8.8 | | |reshape2 |1.4.4 |1.4.4 | | |rintrojs |0.2.2 |0.2.2 | | |rio |0.5.26 |0.5.26 | | |rje |1.10.16 |1.10.16 | | |rjson |0.2.20 |0.2.20 | | |RJSONIO |1.3-1.4 |1.3-1.4 | | |rlang |0.4.10 |0.4.10 | | |RSQLite |2.2.6 |2.2.6 | | |rstatix |0.7.0 |0.7.0 | | |S4Vectors |0.28.1 |0.28.1 | | |sass |0.3.1 |0.3.1 | | |scales |1.1.1 |1.1.1 | | |scatterplot3d |0.3-41 |0.3-41 | | |seriation |1.2-9 |1.2-9 | | |shape |1.4.5 |1.4.5 | | |shiny |1.6.0 |1.6.0 | | |shinycssloaders |1.0.0 |1.0.0 | | |shinydashboard |0.7.1 |0.7.1 | | |shinyjs |2.0.0 |2.0.0 | | |shinyWidgets |0.6.0 |0.6.0 | | |snow |0.4-3 |0.4-3 | | |sourcetools |0.1.7 |0.1.7 | | |sp |1.4-5 |1.4-5 | | |SparseM |1.81 |1.81 | | |statmod |1.4.35 |1.4.35 | | |stringi |1.5.3 |1.5.3 | | |stringr |1.4.0 |1.4.0 | | |SummarizedExperiment |1.20.0 |1.20.0 | | |sys |3.4 |3.4 | | |tibble |3.1.0 |3.1.0 | | |tidyr |1.1.3 |1.1.3 | | |tidyselect |1.1.0 |1.1.0 | | |TSP |1.1-10 |1.1-10 | | |utf8 |1.2.1 |1.2.1 | | |vctrs |0.3.7 |0.3.7 | | |viridis |0.5.1 |0.5.1 | | |viridisLite |0.4.0 |0.4.0 | | |webshot |0.5.2 |0.5.2 | | |withr |2.4.1 |2.4.1 | | |xfun |0.22 |0.22 | | |XML |3.99-0.6 |3.99-0.6 | | |xtable |1.8-4 |1.8-4 | | |XVector |0.30.0 |0.30.0 | | |yaml |2.2.1 |2.2.1 | | |zip |2.1.1 |2.1.1 | | |zlibbioc |1.36.0 |1.36.0 | |