sbcb: Tiny example of bcbioSmallRna object
In lpantano/bcbioSmallRna: small RNA-Seq Utilities
Description
Usage
Format
Details
Author(s)
Description
Raw fastq file were downloaded from ftp.sra.ebi.ac.uk.
Usage
1
Format
An object of class bcbioSmallRnaDataSet of length 4.
Details
Data was analyzed with bcbio_nextgen.
Config files to reproduce the analysis are at:
https://github.com/bcbio/bcbio_srnaseq_output_example
R code to load the data was:
1
2
sbcb = loadSmallRnaRun("~/repos/bcbio_srnaseq_output_example/final",
interestingGroups = "country")
'
Author(s)
Lorena Pantano
lpantano/bcbioSmallRna documentation built on March 5, 2020, 9:17 a.m.
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Description Usage Format Details Author(s)
Description
Raw fastq file were downloaded from ftp.sra.ebi.ac.uk.
Usage
1 |
Format
An object of class bcbioSmallRnaDataSet of length 4.
Details
Data was analyzed with bcbio_nextgen. Config files to reproduce the analysis are at:
https://github.com/bcbio/bcbio_srnaseq_output_example
R code to load the data was:
1 2 | sbcb = loadSmallRnaRun("~/repos/bcbio_srnaseq_output_example/final",
interestingGroups = "country")
|
'
Author(s)
Lorena Pantano
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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