filterMultiSources: Filter multisource contamination

Description Usage Arguments Value References

Description

This function filter multisource contamination

Usage

1
filterMultiSources(filename,output_path,VAFdata,VAFcov,uniq_both)

Arguments

filename

character, contamination file name

output_path

character, output directory

VAFdata

data frame, mutation VAF

VAFcov

data frame, mutation coverage

uniq_both

integer, flag to control type of overlapping mutation in source and target samples

Value

write to contPredict.txt at output_path

References

TBA


lpwgit/sampleContamination documentation built on May 21, 2019, 7:51 a.m.