soybean_ir_metrics: Raw soybean leaves iron-metabolism metrics

In lrutter/bigPint: BIG multivariate data Plotted INTeractively

Raw soybean leaves iron-metabolism metrics

Description

This data contains metrics for raw RNA-sequencing read counts from a soybean dataset that compared leaves that were exposed to iron-rich (iron-postive) soil conditions versus leaves that were exposed to iron -poor (iron-negative) soil conditions. The data was collected 120 minutes after iron conditions were initiated. The metrics include the log fold change and the p-values for all genes and all pairwise combinations of treatment groups.

Format

a RData instance, 1 list per treatment group combination and 1 row per gene

A nested list of length 1. The list contains the metrics for the 56,044 genes for the one treatment group combination.

Details

Raw soybean leaves metrics

• ID gene name

• logFC log fold change

• PValue p-value

See Also

soybean_ir for information about the treatment groups

lrutter/bigPint documentation built on Nov. 11, 2023, 1 a.m.