NEWS.md
In lsigut/openeddy: Post-process eddy covariance data with ease

openeddy 0.0.0.9008

precheck_vars object included
combine_docu() was removed from openeddy and moved to workflow utilities
fix bug: NA instead of 9 in extract_coded() for "attangle" and "nonsteady"
check_manually() now displays also two additional meteo variables (requested by Milan and useful when deciding about outliers)
apply_QC() was added: removes flux values with QC flag = 2
agg_fun() added: you can use arbitrary function for data aggregations (e.g. extracting daily temperature minimum, maximum, etc.)
added filter for LI7200 signal strength in extract_QC()
added humidity filter in extract_QC()
fix bug: correct logic of messages and order of names in choose_avail()
add essential_vars_QC object
added flag_periods: you can define periods that should be flagged (e.g. due to maintenance)
bug fix in check_manually(): this previously led to incorrect ordering of columns in output files (now in user defined order)
bug fix in the computation of spatio-temporal sampling coverage: area integration is now correct so values will slightly differ from previous version
report saving file in check_manually()
bug fix: compute correct area under curve in calc_spti_cov()
flag_runs() amended for better performance
bug fix: ex() was dropping class to list in some cases
ggplot_stats() bugfix: stop on too many repeated values
bug fix: QC issues in remap_vars()

'shift.by' included in check_manually()
allow missing precipitation in plot_eddy() and include examples
allow to set maximum range of automatically computed y-axis limits with 'ylim' in plot_eddy()
add 'ylim' to ggplot_stats() with option to zoom on uncertainty band
support two auxiliary vars in exclude() and accordingly in check_manually()

added read_MeteoDBS(), read_EddyPro(), combine_docu(), strip_suffix(), choose_avail()
added check_manually() that extends exclude() capabilities
added plot_precheck() and plot_hh() for plotting of half-hourly data
aggregation functions report 'days' column, i.e. amount of days in the aggregation period
added barplot_agg() for plotting of aggregated data
added ggplot_stats() for exploring wind direction dependencies in data
added round_df() for rounding double types across data frame
produce integers with extract_coded()
strptime_eddy() output is forced to be of type integer to escape rounding with round_df()
support aggregation of evapotranspiration including unit conversion

git versioning system adopted for openeddy
all changes can be now tracked through the git history
time format support for REddyProc online tool
assignment of attributes varnames and units was simplified
extract_QC(): separated wresid settings for double and planar fit
implemented flag = "between" (and "outside") in apply_thr()
flag_runs(), structure_eddy(), remap_vars(), ex(), merge_eddy() and correct() included
changed default values for despikeLF() and strptime_eddy()
despikeLF arg 'flux' renamed to 'var'; iterative despiking implemented
NAs in plot_eddy test arg shown as flag 2
function exclude() implemented - interactive manual checking
automated recognition of additive filters and NA handling in combn_QC() and summary_QC()
custom plot panels using modules in plot_eddy()
aggregation functions added
allow gaps in strptime_eddy()
add functions to compute Griebel et al. (2020) budgets with uncertainty
add function for assessment of spatio_temporal sampling coverage