calculate_variant_within_group: 'identify_group_variant_breakdown'
In ludwigHoon/minSNPs: Resolution-Optimised SNPs Searcher
calculate_variant_within_group R Documentation
identify_group_variant_breakdown
Description
calculate_variant_within_group is used to identify proportion of different samples
having the same profile.
Usage
calculate_variant_within_group(pattern, meta, target, get_count = FALSE)
Arguments
pattern
list of sequences' pattern (profile)
meta
metadata of the sequences
target
column name of the target group
get_count
whether to return the count of samples rather than the raw number, default to FALSE.
Value
Will return the Simpson's index of the list of patterns.
ludwigHoon/minSNPs documentation built on March 25, 2024, 11:54 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| calculate_variant_within_group | R Documentation |
identify_group_variant_breakdown
Description
calculate_variant_within_group is used to identify proportion of different samples
having the same profile.
Usage
calculate_variant_within_group(pattern, meta, target, get_count = FALSE)
Arguments
pattern |
list of sequences' pattern (profile) |
meta |
metadata of the sequences |
target |
column name of the target group |
get_count |
whether to return the count of samples rather than the raw number, default to FALSE. |
Value
Will return the Simpson's index of the list of patterns.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.