API for luslab/hiclipr
Analyses hiCLIP data

Global functions
AlignReadsBowtie Man page Source code
AnnotateHybrid Man page Source code
AnnotateHybridArm Man page Source code
ConvertToDataTable Man page Source code
ConvertToGRanges Man page Source code
ConvertToGenomicCoordinates Man page Source code
CreateBED Man page Source code
CreateBowtieIndices Man page Source code
CreateDirectories Man page Source code
CreateNonRedundantHybrids Man page Source code
DemultiplexReads Man page Source code
EvaluateBarcodes Man page Source code
ExportBED Man page Source code
ExtractHybrids Man page Source code
ExtractRandomBarcodes Man page Source code
FindDuplex Man page Source code
FindDuplexPositions Man page Source code
FindIslands Man page Source code
FindNonIslandHybrids Man page Source code
GetSequence Man page Source code
LoadBAM Man page Source code
PlotGenicRegion Man page Source code
PlotHybridRegion Man page Source code
PlotIntraInterRatio Man page Source code
PlotLoopLength Man page Source code
PlotRegionMate Man page Source code
RunRNAHybrid Man page Source code
SelectGenicHybrid Man page Source code
luslab/hiclipr documentation built on May 21, 2017, 3:44 p.m.