AlignReadsBowtie: Align and merge reads using Bowtie (as in original paper,...

Description Usage Arguments Value

View source: R/barcodes_mapping_functions.R

Description

Align reads and merge as directed

Usage

1
AlignReadsBowtie(fq.file, bam.file, processors)

Arguments

fq.file

FASTQ file (unzipped)

bam.file

output BAM filename

processors

Number of processors to use

Value

SAM file of alignments


luslab/hiclipr documentation built on May 21, 2017, 3:44 p.m.