Files in luslab/hiclipr
Analyses hiCLIP data
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/.Rapp.history
R/barcodes_mapping_functions.R
R/hybrid_functions.R
R/plotting_functions.R
R/preprocessing.R
R/rnahybrid.R
R/sysdata.rda
README.md
hiclipr.Rproj
man/AlignReadsBowtie.Rd
man/AnnotateHybrid.Rd
man/AnnotateHybridArm.Rd
man/ConvertToDataTable.Rd
man/ConvertToGRanges.Rd
man/ConvertToGenomicCoordinates.Rd
man/CreateBED.Rd
man/CreateBowtieIndices.Rd
man/CreateDirectories.Rd
man/CreateNonRedundantHybrids.Rd
man/DemultiplexReads.Rd
man/EvaluateBarcodes.Rd
man/ExportBED.Rd
man/ExtractHybrids.Rd
man/ExtractRandomBarcodes.Rd
man/FindDuplex.Rd
man/FindDuplexPositions.Rd
man/FindIslands.Rd
man/FindNonIslandHybrids.Rd
man/GetSequence.Rd
man/LoadBAM.Rd
man/PlotGenicRegion.Rd
man/PlotHybridRegion.Rd
man/PlotIntraInterRatio.Rd
man/PlotLoopLength.Rd
man/PlotRegionMate.Rd
man/RunRNAHybrid.Rd
man/SelectGenicHybrid.Rd
