writeGMT: Create a gmt (gene matrix transposed) file

Description Usage Arguments Value Author(s)

Description

Createss a gmt (gene matrix transposed) file such as those provided by mSigDB or geneSigDB, from an R list object. Function by Levi Waldron.

Usage

1
writeGMT(object, fname)

Arguments

object

R list object that will be converted to GMT file. Each element should contain a vector of gene names, and the names of the elements will used for the gene set names

fname

Output file name for .gmt file

Value

Called for the effect of writing a .gmt file

Author(s)

Levi Waldron and Markus Riester


lwaldron/LeviRmisc documentation built on May 21, 2019, 8:59 a.m.