dbscan2mvc: dbscan2mvc

Description Usage Arguments Value

View source: R/dbscan2mvc.R

Description

Convert a dbscan ouput to metavariant clusters

Usage

1
dbscan2mvc(dbscanRes, cov, mvcMinVar = 1000, mvcMinCov = 5)

Arguments

dbscanRes

dbscan result.

cov

metavaraint loci depth of coverage dataframe.

mvcMinVar

minimum number of metavariants for mvc, set to 1,000 by default.

mvcMinCov

minimum vamue for the median depth of coverage

Value

a list of object of class mvc


madoui/metaVaR documentation built on June 6, 2020, 2:09 p.m.