Files in magStra/BSure
What the Package Does (One Line, Title Case)

.DS_Store

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.gitattributes

.gitignore

BSure.Rproj

DESCRIPTION

HT29_full_extracted_output.rda

NAMESPACE

R/BSure-package.R R/Behan_et_al_list_differentially_essential_sub.R R/HT29_full_extracted_output.R R/additional_functions.R R/auxData.R R/core_functions.R R/counts_HT29.R R/counts_HT29_small.R R/post_processing_functions.R R/resultsK562_highCas9_extracted_output.R R/resultsK562_lowest_extracted_output.R R/results_K562_high_extracted_output.rda.R R/results_K562_highest_extracted_output.R R/stanmodels.R README.md

configure

configure.win

data/.DS_Store

data/Behan_et_al_list_differentially_essential_sub.rda

data/HT29_full_extracted_output.rda

data/auxData.rda

data/counts_HT29.rda

data/counts_HT29_small.rda

data/counts_dgrna.rda

data/iPSC_extracted_output.rda

data/resultsK562_highCas9_extracted_output.rda

data/resultsK562_high_extracted_output.rda

data/resultsK562_highest_3_5_extracted_output.rda

data/resultsK562_highest_extracted_output.rda

data/resultsK562_lowest_extracted_output.rda

inst/.DS_Store

inst/include/stan_meta_header.hpp

inst/stan/BSure.stan

inst/stan/computeParamsMultivariateN.stan

inst/stan/include/license.stan

man/BSure-package.Rd man/compare_length_of_credible_intervals.Rd man/compare_to_gold_standard.Rd man/compute_lfc_from_counts.Rd man/compute_mean_lfc.Rd man/create_small_subset.Rd man/extract_from_output.Rd man/extract_gene_categories.Rd man/extract_gene_categories_FNR.Rd man/find_differential_genes.Rd man/fit_bivariate_nv2.Rd man/plot_credible_intervals.Rd man/runBSure.Rd

resultsK562_highest_3_5_extracted_output.rda

src/.DS_Store

src/BSure.so

src/Makevars

src/Makevars.win

src/RcppExports.cpp

src/RcppExports.o

src/stanExports_BSure.cc

src/stanExports_BSure.h

src/stanExports_BSure.o

src/stanExports_computeParamsMultivariateN.cc

src/stanExports_computeParamsMultivariateN.h

src/stanExports_computeParamsMultivariateN.o

temp/temp_Rhat_credible_interval.pdf temp/temp_credible_intervals_as_function_of_mean.pdf temp/temp_credible_intervals_ordered_by_mean.pdf temp/temp_density_length_of_credible_interval.pdf temp/temp_tail_ESS_credible_interval.pdf

vignettes/.DS_Store

vignettes/BSure.Rmd

vignettes/BSure.html

vignettes/BSure.log

vignettes/BSurePackage.bib

vignettes/HT29_lfc_small.rda

vignettes/HT29_lfc_small_EssentialEss.rda

vignettes/HT29_lfc_small_EssentialNE.rda

vignettes/HT29_lfc_small_priors_data.pdf

vignettes/HT29_lfc_small_sub.rda

vignettes/HT29_lfc_small_sub_EssentialEss.rda

vignettes/HT29_lfc_small_sub_EssentialNE.rda

vignettes/HT29_lfc_small_sub_priors_data.pdf

vignettes/HT29_lfc_small_subdistEssNE.rda

vignettes/HT29_lfc_smalldistEssNE.rda

vignettes/figure/unnamed-chunk-10-1.png

vignettes/figure/unnamed-chunk-10-2.png

vignettes/figure/unnamed-chunk-10-3.png

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magStra/BSure documentation built on April 27, 2021, 3:30 a.m.

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magStra/BSure
What the Package Does (One Line, Title Case)

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What the Package Does (One Line, Title Case)

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magStra/BSure What the Package Does (One Line, Title Case)

Files in magStra/BSure What the Package Does (One Line, Title Case)

R Package Documentation

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magStra/BSure
What the Package Does (One Line, Title Case)

Files in magStra/BSure
What the Package Does (One Line, Title Case)