plot_credible_intervals: plot_credible_intervals

Description Usage Arguments Value

View source: R/post_processing_functions.R

Description

plot_credible_intervals

Usage

1
plot_credible_intervals(extracted_output, name)

Arguments

extracted_output

output of the function extract_from_output

name

name of the screen for naming of output folder and pdf files

Value

creates pdf files with the following plots:

  1. credible_intervals_as_function_of_mean: credible intervals of essentiality estimates along y-axis, mean of essentality estimates on x-axis

  2. credible_intervals_ordered_by_mean: credible intervals of essentiality estimates along y-axis, ordered by mean of essentiality estimates (ordered along x-axis)

  3. density_length_of_credible_interval: density distribution of the lengths of the credible intervals

  4. tail_ESS_credible_interval and Rhat_credible_interval: diagnostic plots to identify any correlation between convergence measures and the lengths of credible intervals. If there is correlation (which is rare) this may point to convergence problems of the sampler, and the results may be less reliable.


magStra/BSure documentation built on April 27, 2021, 3:30 a.m.