Description Usage Arguments Value
View source: R/post_processing_functions.R
plot_credible_intervals
1 | plot_credible_intervals(extracted_output, name)
|
extracted_output |
output of the function extract_from_output |
name |
name of the screen for naming of output folder and pdf files |
creates pdf files with the following plots:
credible_intervals_as_function_of_mean: credible intervals of essentiality estimates along y-axis, mean of essentality estimates on x-axis
credible_intervals_ordered_by_mean: credible intervals of essentiality estimates along y-axis, ordered by mean of essentiality estimates (ordered along x-axis)
density_length_of_credible_interval: density distribution of the lengths of the credible intervals
tail_ESS_credible_interval and Rhat_credible_interval: diagnostic plots to identify any correlation between convergence measures and the lengths of credible intervals. If there is correlation (which is rare) this may point to convergence problems of the sampler, and the results may be less reliable.
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