getSumExpFromGenotypeTable: Create Summarized Experiment from a TASSEL Genotype Table
In maize-genetics/bioconductor_test: R front-end for TASSEL
Description
Usage
Arguments
Value
View source: R/GenotypeTableFunctions.R
Description
This function will generate an object of
SummarizedExperiment class for marker data derived from a
TasselGenotypePhenotype class object.
Usage
1
getSumExpFromGenotypeTable(tasObj, useRef = FALSE)
Arguments
tasObj
An object of class TasselGenotypePenotype.
useRef
Use reference alleles or major alleles at sites. If
FALSE, major alleles will be used.
Value
Returns a SummarizedExperiment of TASSEL genotype data.
maize-genetics/bioconductor_test documentation built on Nov. 4, 2019, 5:19 p.m.
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Description Usage Arguments Value
View source: R/GenotypeTableFunctions.R
Description
This function will generate an object of
SummarizedExperiment class for marker data derived from a
TasselGenotypePhenotype class object.
Usage
1 | getSumExpFromGenotypeTable(tasObj, useRef = FALSE)
|
Arguments
tasObj |
An object of class |
useRef |
Use reference alleles or major alleles at sites. If
|
Value
Returns a SummarizedExperiment of TASSEL genotype data.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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