kinshipMatrix: Create a TASSEL kinship matrix
In maize-genetics/bioconductor_test: R front-end for TASSEL
Description
Usage
Arguments
Value
View source: R/AnalysisRelatednessFunctions.R
Description
This function will calculate a kinship matrix using
TASSEL's Kinship plugin and respective parameters.
Usage
1
2
kinshipMatrix(tasObj, method = "Centered_IBS", maxAlleles = 6,
algorithmVariation = "Observed_Allele_Freq")
Arguments
tasObj
An object of class TasselGenotypePenotype.
method
A Kinship method.
maxAlleles
Maximum number of alleles.
algorithmVariation
Algorithm variation.
Value
Returns a Java pointer of a TASSEL kinship matrix object.
maize-genetics/bioconductor_test documentation built on Nov. 4, 2019, 5:19 p.m.
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Description Usage Arguments Value
View source: R/AnalysisRelatednessFunctions.R
Description
This function will calculate a kinship matrix using
TASSEL's Kinship plugin and respective parameters.
Usage
1 2 | kinshipMatrix(tasObj, method = "Centered_IBS", maxAlleles = 6,
algorithmVariation = "Observed_Allele_Freq")
|
Arguments
tasObj |
An object of class |
method |
A Kinship method. |
maxAlleles |
Maximum number of alleles. |
algorithmVariation |
Algorithm variation. |
Value
Returns a Java pointer of a TASSEL kinship matrix object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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