Files in markrobinsonuzh/treeAGG
Tree Aggregation
DESCRIPTION
NAMESPACE
NEWS
R/allClass.R
R/allGenerics.R
R/classAccessor.R
R/classValid.R
R/data.R
R/fdr.R
R/findAncestor.R
R/findOS.R
R/findSibling.R
R/isLeaf.R
R/matTree.R
R/nodeValue.R
R/parEstimate.R
R/rmDesc.R
R/runEdgeR.R
R/selNode.R
R/shareNode.R
R/signalNode.R
R/simData.R
R/topNodes.R
R/tpr.R
R/transNode.R
R/treeAGG.R
R/treePlot.R
R/updateTSE.R
R/viewSim.R
README.md
data/bigTree.RData
data/cytofCluster.rda
data/cytofCount.rda
data/cytofSample.rda
data/cytofTree.rda
data/cytofTruth.rda
data/exTree.RData
data/tinyTree.RData
man/bigTree.Rd
man/checkLSE.Rd
man/dot-addBranch.Rd
man/dot-addLegend.Rd
man/dot-addPoint.Rd
man/dot-addZoom.Rd
man/dot-colScale.Rd
man/dot-designMatrix.Rd
man/dot-doCount.Rd
man/dot-doData.Rd
man/dot-doFC.Rd
man/dot-fdr0.Rd
man/dot-findParallel.Rd
man/dot-infLoc.Rd
man/dot-pickLoc.Rd
man/dot-sizeScale.Rd
man/dot-tpr0.Rd
man/exTree.Rd
man/fdr.Rd
man/findAncestor.Rd
man/findOS.Rd
man/findSibling.Rd
man/internal_rowData-class.Rd
man/isLeaf.Rd
man/leafSummarizedExperiment-class.Rd
man/leafSummarizedExperiment-constructor.Rd
man/matTree.Rd
man/nodeValue.Rd
man/parEstimate.Rd
man/phylo.Rd
man/rmDesc.Rd
man/runEdgeR.Rd
man/selNode.Rd
man/shareNode.Rd
man/signalNode.Rd
man/simData.Rd
man/tinyTree.Rd
man/topNodes.Rd
man/tpr.Rd
man/transNode.Rd
man/treeAGG.Rd
man/treePlot.Rd
man/treeSummarizedExperiment-accessor.Rd
man/treeSummarizedExperiment-class.Rd
man/treeSummarizedExperiment-constructor.Rd
man/updateTSE.Rd
man/viewSim.Rd
tests/testthat.R
tests/testthat/test-Accessor.R
tests/testthat/test-constructors.R
tests/testthat/test-fdr.R
tests/testthat/test-findAncestor.R
tests/testthat/test-findOS.R
tests/testthat/test-findSibling.R
tests/testthat/test-isLeaf.R
tests/testthat/test-matTree.R
tests/testthat/test-nodeValue.R
tests/testthat/test-rmDesc.R
tests/testthat/test-selNode.R
tests/testthat/test-shareNode.R
tests/testthat/test-signalNode.R
tests/testthat/test-simData.R
tests/testthat/test-topNodes.R
tests/testthat/test-tpr.R
tests/testthat/test-transNode.R
vignettes/Example_of_data_analysis.Rmd
vignettes/Examples_of_simulations.Rmd
vignettes/Flowchart.png
vignettes/Introduction_to_leafSummarizedExperiment_and_treeSummarizedExperiment.Rmd
vignettes/scene.png
vignettes/treeAGG_vignette.bib
vignettes/tse.png
