Description Usage Arguments Value Author(s)
.doFC
generates fold changes for different scenarios
1 2 |
tree |
A phylo object |
data |
The real data (count table) |
scenario |
Scenarios (“S1”, “S2”, “S3”) |
branchA |
The branch node label of branch A. |
branchB |
The branh node label of branch B. |
ratio |
The proportion ratio between |
adjB |
A numeric value between 0 and 1 (only for |
pct |
The percentage (in number) of the leaves in branchA that will swap with branchB. The default is 1. |
numeric vector
Ruizhu Huang
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