Description Usage Arguments Value Author(s)
.doCount
generates a count table given some available information.
Here, the information includes the fold change between two conditions,
the parameters of Negative Binomial distritubion (which the sample library
size follows), a data table from real data (to estimate the proportion of
each entity in the sample), and the number of samples in two different
groups or conditions.
1 |
data |
A matrix or data frame, representing the count table from real data |
FC |
A numeric vector, representing the fold changes |
nSam |
A vector of length two containing the number of samples in two different groups or conditions. |
mu, size |
The parameters of the Negative Binomial distribution (see mu
and size in |
n |
A numeric value, representing the number of count tables generated. If above one, the output is a list of matrices. |
a matrix or a list of matrices
Ruizhu Huang
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