context("rcgam calibration")
test_that("rcgam calibration works for data frames and rcData", {
data(Phosphorus)
pdat = makeModelData(Phosphorus)
expect_is(rcgam(c ~ s(q) + s(doy, bs = "cc", k = 4) + s(time), pdat), "rcgam")
expect_is(rcgam(c ~ s(q) + s(doy, bs = "cc", k = 4) + s(time), Phosphorus), "rcgam")
nocall <- function(obj) {obj$call = NULL; obj}
expect_equal(nocall(rcgam(c ~ s(q) + s(doy, bs = "cc", k = 4) + s(time), pdat)),
nocall(rcgam(c ~ s(q) + s(doy, bs = "cc", k = 4) + s(time), Phosphorus)))
})
# test_that("ggTermPlot function works with model objects", {
# data(Phosphorus)
# pdat = makeModelData(Phosphorus)
# mod1 = rcgam(c ~ s(q) + s(doy, bs = "cc", k = 4) + s(time), pdat)
# expect_is("gg", )
# })
test_that("rcgams can be converted to gams", {
data(Phosphorus)
library(mgcv)
pdat = makeModelData(Phosphorus)
mod2 <- rcgam(c ~ s(q) + s(doy, bs = "cc", k = 4) + s(time), pdat)
expect_is(as.gam(mod2), "gam")
expect_false(is(as.gam(mod2), "rcgam"))
expect_identical(predict.gam(as.gam(mod2)), predict(as.gam(mod2)))
data(goodgam, package = "markstats")
expect_identical(attributes(as.gam(mod2)), attributes(goodgam))
})
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