Tx2Gene: Aggregate Transcript Counts to Gene-Level Counts

Description Usage Arguments Value Examples

View source: R/getDEE2.R

Description

This function converts Kallisto transcript-level expression estimates to gene-level estimates. Counts for each transcript are summed to get an aggregated gene level score.

Usage

1

Arguments

x

a getDEE2 object.

Value

a dataframe of gene expression counts.

Examples

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x <- getDEE2("scerevisiae",c("SRR1755149","SRR1755150"),legacy=TRUE)
x <- Tx2Gene(x)

markziemann/getDEE2 documentation built on Dec. 21, 2021, 2:48 p.m.