autoLimmaComparison: Automatic limma analysis

Description Usage Arguments Value

View source: R/limma_pairwise_comparison.R

Description

Perform the default limma analysis given a data matrix, a sample information data frame and a grouping column.

Usage

1
autoLimmaComparison(mat, sampInfo, groupCol, removeColName = TRUE, ...)

Arguments

mat

Matrix with data to analyse.

sampInfo

sampInfo The sample information data frame.

groupCol

groupCol The column containing the grouping variable

removeColName

Remove column name from design matrix?

...

Other arguments passed to limmaDfFromContrasts.

Value

A data frame with the results in a tidy format.


martingarrido/biokit documentation built on June 27, 2021, 2:21 a.m.