NBC_MBC_annotation_df: Annotation dictionary for naive and memory B cells (NBC-MBC)

NBC_MBC_annotation_dfR Documentation

Annotation dictionary for naive and memory B cells (NBC-MBC)

Description

In version 1 of the atlas, we changed the clusters and annotation for NBC-MBC prior to publishing the preprint. Since, there is not a 1:1 mapping between clusters, here we provide the correspondence between the annotations in February 2022 and the preprint (June 2022) for each NBC-MBC cell barcode.

Format

A dataframe with 112478 NBC-MBC and 5 variables

barcode

cell barcode

names_level_5_clusters_eta

Cell annotation given by the B-cell annotation team in February 2022

annotation_20220619

Cell annotation given by the B-cell annotation team June 2022 (preprint)

UMAP_1

UMAP1 coordinates

UMAP_2

UMAP2 coordinates

Details

This data is used by the updateAnnotation function in B cells.

Source

https://zenodo.org/record/8373756


massonix/HCATonsilData documentation built on May 7, 2024, 8:33 a.m.