Heatmap: Heatmap visualization of data

In mathiaskalxdorf/IceR: Requantification of label-free DDA proteomics data pre-analyzed by MaxQuant.

Heatmap visualization of data

Description

Heatmap visualization of data

Usage

Heatmap(
  data,
  annotation,
  annotation_name = "Anno",
  main = "Heatmap",
  colors_annotation,
  colors_plot = NA,
  color_breaks = NA,
  hclust_col = T,
  hclust_row = T,
  show_rownames = T,
  show_colnames = F,
  fontsize_rows = 10,
  interactive = F,
  row_labels = NULL
)

Arguments

data	Data.frame
annotation	Conditions per samples in columns of data
annotation_name	Displayed name for annotation
main	Plot main title
colors_annotation	Annotation colors
colors_plot	Colors for heatmap
color_breaks	Color breaks for heatmap
hclust_col	Cluster cols?
hclust_row	Cluster rows?
show_rownames	Show rownames?
show_colnames	Show colnames?
fontsize_rows	Fontsize of rows
interactive	Interactive heatmap
row_labels	Special rowlabels

Details

Heatmap visualization of data

Value

Plot.

mathiaskalxdorf/IceR documentation built on Aug. 1, 2022, 8:03 a.m.