vignettes/MRCIEUGTEx.R

In mbyvcm/MRCIEUGTEx: Functions for the analysis of GTEx data

## ---- eval=FALSE---------------------------------------------------------
#  # requires devtools
#  install.packages('devtools')
#  library(devtools)
#  
#  # install package from github
#  install_github("mbyvcm/MRCIEUGTEx", quiet = T)
#  library(MRCIEUGTEx)

## ---- eval=FALSE---------------------------------------------------------
#  # path to GTEx VCF file
#  gtex_vcf_dir <- ""
#  
#  # path to expression & covariate tar directories downloaded from GTEx Portal
#  covariate_matrix_tar  <- ""
#  expression_matrix_tar <- ""

## ---- eval=F-------------------------------------------------------------
#  source('config.R')

## ---- eval=FALSE---------------------------------------------------------
#