addFileLink: Saves a file that will show up as a link in Seurat

In mcneilco/racas: R Package for ACAS

Saves a file that will show up as a link in Seurat

Description

Saves an analysis group with states and values holding a file or url. Each batchCode has a separate state with the annotation.

Usage

addFileLink(batchCodeList, recordedBy, experiment, lsTransaction,
  reportFileSummary = NULL, reportFilePath = NULL, fileType = NULL,
  url = NULL, testMode = FALSE)

Arguments

batchCodeList	A list or vector of batch codes
recordedBy	The username of the person recording the data
experiment	A list that is an experiment object, needs to have values for id, verison, and codeName
lsTransaction	A number that is a transaction id
reportFileSummary	A description of the file or url annotation
reportFilePath	The path to the report file (may be relative)
fileType	The type of the annotation, used by some custom services
url	A url (e.g. http://google.com)
testMode	a boolean used for testing

Details

Must have either a reportFilePath or a url, but having both will result in the url being ignored.

mcneilco/racas documentation built on Aug. 30, 2024, 9:27 p.m.