expected_z_score: Compute expected Z Score
In mdfortune/simGWAS: Simulating the expected output from a GWAS with a given causal model
Usage
Arguments
Value
Author(s)
Usage
1
expected_z_score(N0, N1, snps, W, gamma.CV, freq)
Arguments
N0
The number of Y=0
N1
The number of Y=1
snps
The snps at which we wish to compute the expected Z Score
W
The true causal SNPs (these need not be in "snps")
gamma.CV
The log odds ratios of effect of the true causal SNPs
freq
Frequencies of SNP appearances (computed using snphap)
Value
The expected Z Score for all snps in snps, assuming the causal SNPs are W
Author(s)
Mary Fortune
mdfortune/simGWAS documentation built on May 22, 2019, 3:25 p.m.
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Usage Arguments Value Author(s)
Usage
1 | expected_z_score(N0, N1, snps, W, gamma.CV, freq)
|
Arguments
N0 |
The number of Y=0 |
N1 |
The number of Y=1 |
snps |
The snps at which we wish to compute the expected Z Score |
W |
The true causal SNPs (these need not be in "snps") |
gamma.CV |
The log odds ratios of effect of the true causal SNPs |
freq |
Frequencies of SNP appearances (computed using snphap) |
Value
The expected Z Score for all snps in snps, assuming the causal SNPs are W
Author(s)
Mary Fortune
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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