Files in merrillrudd/LIME
Length-based Integrated Mixed Effects (LIME) assessment method
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/AgeToLengthComp.R
R/Calc_derived_quants.R
R/LFreq_df.R
R/age_length.R
R/calc_equil_abund.R
R/calc_msy.R
R/calc_ref.R
R/create_inputs.R
R/create_lh_list.R
R/format_input.R
R/generate_data.R
R/getFt.R
R/get_converged.R
R/model_paths.R
R/mytheme.R
R/plot_LCfits.R
R/plot_output.R
R/print_letter.R
R/read_sdreport.R
R/run_LIME.R
R/run_single.R
R/run_stacking.R
R/sim_pop.R
README.md
docs/LIME.html
docs/LIME.pdf
examples/demo_multifleet/B17.ctl
examples/demo_multifleet/B17.dat
examples/demo_multifleet/Catch_multifleet.csv
examples/demo_multifleet/Exercise_3_LBSPR.xlsx
examples/demo_multifleet/LIME_demo.R
examples/demo_multifleet/Length_multifleet.csv
examples/demo_multifleet/Length_multiyear_multifleet.csv
examples/demo_multifleet/Length_singleyear.csv
examples/demo_multifleet/~$Exercise_3_LBSPR.xlsx
examples/demo_pulldata/LIME_example_UploadSimData.R
examples/demo_pulldata/LIME_output.rds
examples/demo_pulldata/sim_data/1/True.rds
examples/demo_pulldata/sim_data/Catch_20yrs.csv
examples/demo_pulldata/sim_data/Index_20yrs.csv
examples/demo_pulldata/sim_data/LF_20yrs.csv
examples/demo_simdata/LIME_example_SimData.R
man/AgeToLengthComp.Rd
man/LFreq_df.Rd
man/LIME-package.Rd
man/age_length.Rd
man/calc_derived_quants.Rd
man/calc_equil_abund.Rd
man/calc_msy.Rd
man/calc_ref.Rd
man/create_inputs.Rd
man/create_lh_list.Rd
man/format_input.Rd
man/generate_data.Rd
man/getFt.Rd
man/get_converged.Rd
man/model_paths.Rd
man/mytheme.Rd
man/plot_LCfits.Rd
man/plot_output.Rd
man/print_letter.Rd
man/read_sdreport.Rd
man/run_LIME.Rd
man/run_stacking.Rd
man/sim_pop.Rd
src/LIME.cpp
tests/testthat.R
tests/testthat/test_life_history.R
tests/testthat/test_run.R
tests/testthat/test_sims.R
update.R
vignettes/LIME.Rmd
vignettes/LIME.pdf
